Plasmid / Primer Compatibility
Below are tables showing the compatibility of common sequencing primers with common plasmids. Since we cannot provide information on all primers / plasmids in use, if you do not see the information you need, please check for compatibility yourself. We do have some advice on checking primer compatibility.
In the tables below, "+" indicates that the priming site is present. "-" indicates that, to the best of our knowledge, the priming site is not present.
Common Cloning Vectors
| Vector | Mnfr |
T7 |
T3 |
M13F |
M13R |
KS |
SP6 |
T7 Term |
| pBluescript I & II | + |
+ |
+ |
+ |
+ |
- |
- |
|
| pPCR Script | + |
+ |
- |
+ |
+ |
- |
- |
|
| pCR2.1 ,-XL, -Blunt | + |
- |
+ |
+ |
- |
- |
- |
|
| pCR-II, pCR-Blunt-II | + |
- |
+ |
+ |
- |
+ |
- |
|
| pGEM-1, 9Zf | + |
- |
- |
- |
- |
+(*) |
- |
|
| pGEM-3Z; -3,5,7,11,13Zf | + |
- |
- |
- |
- |
+ |
- |
|
| pGEM-4Z | + |
- |
+ |
+ |
- |
+(*) |
- |
|
| pGEM-T, -T Easy | + |
- |
+ |
+ |
- |
+ |
- |
|
| pT7T3 | + |
+ |
- |
- |
- |
- |
- |
|
| Lambda Zap | + |
+ |
+ |
+ |
+ |
- |
- |
* There is a 4 bp mismatch at the 5' end of the priming sequence in this vector.
pGEX GST-fusion Vectors
| Vector | Mnfr |
pGEX-F |
pGEX-R |
| pGEX-1, pGEX-1lT | + |
+ |
|
| pGEX-2T, pGEX-2TK | + |
+ |
|
| pGEX-3X | + |
+ |
|
| pGEX-4T1, -4T2, -4T3 | + |
+ |
|
| pGEX-5X1, -5X2, -5X3 | + |
+ |
|
| pGEX-6P1, -6P2, -6P3 | + |
+ |
|
| pEBG-2T | N/A |
+ |
? |
T7 Promoter Vectors
| Vector | Mnfr |
T7 |
T7 Term |
| pET (all known) | + |
+ |
|
| pT7-7 | N/A |
+ |
? |
Baculovirus Expression Vectors
| Vector | Mnfr |
Forward |
Reverse |
| pFastBac-1 | + |
+ |
|
| pFastBac-HTa, -HTb, -HTc | + |
+ |
Mammalian Expression Vectors
| Vector | Mnfr |
CMV-F |
CMV-R |
T7 |
SP6 |
| pCDNA3 | + |
+(*) |
|||
| pCMV5 | + |
+ |
* The "T" residue at base 4 of the new SP6 primer is not present in the pCDNA3 SP6 priming site.
